SHOGoiN Cell Transcriptome: GSM1677521

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677521


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T49The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 133.6871
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 107.8356
3 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 49.3933
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 49.2373
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 45.9606
6 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 45.1258
7 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 42.9378
8 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 41.0068
9 ENSG00000283041 NA 35.6714
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 34.4266

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000276984 NA -0.0936
57169 ENSG00000276980 NA -0.0936
57168 ENSG00000276972 NA -0.0936
57167 ENSG00000276968 NA -0.0936
57166 ENSG00000276966 HIST1H4E histone cluster 1 H4 family member e -0.0936
57165 ENSG00000276965 NA -0.0936
57164 ENSG00000276964 DUX4L23 double homeobox 4 like 23 -0.0936
57163 ENSG00000276963 NA -0.0936
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 34.4266
9 ENSG00000283041 NA 35.6714

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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