SHOGoiN Cell Transcriptome: GSM1677523

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677523


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T51The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 163.9194
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 86.5252
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 58.4064
4 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 39.9984
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 38.7981
6 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 36.3269
7 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 33.8860
8 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 33.5077
9 ENSG00000184009 ACTG1 actin gamma 1 31.2937
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 27.4432

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277050 NA -0.0931
57170 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.0931
57168 ENSG00000277047 NA -0.0931
57166 ENSG00000277041 NA -0.0931
57165 ENSG00000277040 NA -0.0931
57164 ENSG00000277039 NA -0.0931
57163 ENSG00000277035 NA -0.0931
57162 ENSG00000277034 NA -0.0931
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 27.4432
9 ENSG00000184009 ACTG1 actin gamma 1 31.2937

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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