SHOGoiN Cell Transcriptome: GSM1677525

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677525


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T53The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 148.7404
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 76.5782
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 74.3979
4 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 40.2783
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 35.9248
6 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 35.4780
7 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 30.2121
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 27.5967
9 ENSG00000283041 NA 26.3311
10 ENSG00000184009 ACTG1 actin gamma 1 26.0855

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276992 NA -0.1200
57170 ENSG00000276991 NA -0.1200
57167 ENSG00000276988 NA -0.1200
57165 ENSG00000276984 NA -0.1200
57163 ENSG00000276975 HYDIN2 HYDIN2, axonemal central pair apparatus protein (pseudogene) -0.1200
57162 ENSG00000276972 NA -0.1200
10 ENSG00000184009 ACTG1 actin gamma 1 26.0855
9 ENSG00000283041 NA 26.3311
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 27.5967
7 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 30.2121

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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