SHOGoiN Cell Transcriptome: GSM1677526

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677526


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T54The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 180.9059
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 79.2882
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 51.2508
4 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 35.0176
5 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 34.1115
6 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 27.3885
7 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 27.0804
8 ENSG00000283041 NA 26.0330
9 ENSG00000184009 ACTG1 actin gamma 1 25.4567
10 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 25.3190

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277041 NA -0.0908
57170 ENSG00000277040 NA -0.0908
57169 ENSG00000277039 NA -0.0908
57168 ENSG00000277035 NA -0.0908
57167 ENSG00000277034 NA -0.0908
57166 ENSG00000277031 RN7SL796P RNA, 7SL, cytoplasmic 796, pseudogene -0.0908
57165 ENSG00000277030 MIR8071-2 microRNA 8071-2 -0.0908
57164 ENSG00000277029 RNU6-1192P RNA, U6 small nuclear 1192, pseudogene -0.0908
57163 ENSG00000277027 RMRP RNA component of mitochondrial RNA processing endoribonuclease -0.0908
10 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 25.3190

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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