SHOGoiN Cell Transcriptome: GSM1677528

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677528


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T56The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 152.3323
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 90.3760
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 83.1165
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 41.6086
5 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 39.6671
6 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 35.4726
7 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 32.2009
8 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 30.1313
9 ENSG00000283041 NA 28.0152
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 27.6688

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277052 MIR6763 microRNA 6763 -0.0973
57169 ENSG00000277051 NA -0.0973
57168 ENSG00000277050 NA -0.0973
57167 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.0973
57165 ENSG00000277047 NA -0.0973
57163 ENSG00000277041 NA -0.0973
57162 ENSG00000277040 NA -0.0973
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 27.6688
9 ENSG00000283041 NA 28.0152
8 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 30.1313

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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