SHOGoiN Cell Transcriptome: GSM1677529

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677529


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T57The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 110.4233
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 98.6112
3 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 65.6394
4 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 56.9706
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 46.4210
6 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 45.3401
7 ENSG00000283041 NA 43.9220
8 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 41.3408
9 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 40.4761
10 ENSG00000184009 ACTG1 actin gamma 1 37.1988

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277035 NA -0.1139
57170 ENSG00000277034 NA -0.1139
57169 ENSG00000277031 RN7SL796P RNA, 7SL, cytoplasmic 796, pseudogene -0.1139
57168 ENSG00000277030 MIR8071-2 microRNA 8071-2 -0.1139
57167 ENSG00000277029 RNU6-1192P RNA, U6 small nuclear 1192, pseudogene -0.1139
57166 ENSG00000277027 RMRP RNA component of mitochondrial RNA processing endoribonuclease -0.1139
57164 ENSG00000277024 NA -0.1139
57162 ENSG00000277022 NA -0.1139
10 ENSG00000184009 ACTG1 actin gamma 1 37.1988
9 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 40.4761

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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