SHOGoiN Cell Transcriptome: GSM1677530

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677530


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T58The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 130.8401
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 102.6318
3 ENSG00000184009 ACTG1 actin gamma 1 60.3832
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 57.7478
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 46.4329
6 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 42.7389
7 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 39.8032
8 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 37.2804
9 ENSG00000283041 NA 36.5446
10 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 25.7929

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277138 MIR6509 microRNA 6509 -0.1029
57169 ENSG00000277136 NA -0.1029
57168 ENSG00000277135 NA -0.1029
57167 ENSG00000277133 NA -0.1029
57166 ENSG00000277130 NA -0.1029
57165 ENSG00000277129 NA -0.1029
57164 ENSG00000277128 NA -0.1029
57163 ENSG00000277127 NA -0.1029
57162 ENSG00000277125 NA -0.1029
10 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 25.7929

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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