SHOGoiN Cell Transcriptome: GSM1677533

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677533


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T61The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 161.3363
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 79.0999
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 32.3453
4 ENSG00000204628 RACK1 receptor for activated C kinase 1 28.7643
5 ENSG00000174444 RPL4 ribosomal protein L4 28.6033
6 ENSG00000184009 ACTG1 actin gamma 1 27.4566
7 ENSG00000100316 RPL3 ribosomal protein L3 26.7055
8 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 24.2243
9 ENSG00000142541 RPL13A ribosomal protein L13a 23.8018
10 ENSG00000070756 PABPC1 poly(A) binding protein cytoplasmic 1 23.2251

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.1053
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.1053
58733 ENSG00000285992 novel transcript -0.1053
58732 ENSG00000285991 novel transcript -0.1053
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.1053
58730 ENSG00000285989 TEC -0.1053
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.1053
58728 ENSG00000285987 NA -0.1053
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.1053
58726 ENSG00000285985 NA -0.1053

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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