SHOGoiN Cell Transcriptome: GSM1677534

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677534


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T62The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 120.2956
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 110.6100
3 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 54.6858
4 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 50.5794
5 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 43.1891
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 38.8903
7 ENSG00000184009 ACTG1 actin gamma 1 32.1171
8 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 25.1381
9 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 23.7052
10 ENSG00000126777 KTN1 kinectin 1 22.7964

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277168 NA -0.1173
57170 ENSG00000277162 NA -0.1173
57169 ENSG00000277161 PIGW phosphatidylinositol glycan anchor biosynthesis class W -0.1173
57167 ENSG00000277159 NA -0.1173
57165 ENSG00000277157 HIST1H4D histone cluster 1 H4 family member d -0.1173
57164 ENSG00000277156 NA -0.1173
57162 ENSG00000277152 NA -0.1173
10 ENSG00000126777 KTN1 kinectin 1 22.7964
9 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 23.7052
8 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 25.1381

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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