SHOGoiN Cell Transcriptome: GSM1677535

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677535


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T63The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 125.6205
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 90.5204
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 57.9907
4 ENSG00000283041 NA 45.0372
5 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 44.7112
6 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 41.7639
7 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 37.7665
8 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 33.1678
9 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 28.3997
10 ENSG00000135535 CD164 CD164 molecule 23.9281

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277103 NA -0.1241
57168 ENSG00000277099 NA -0.1241
57166 ENSG00000277096 NA -0.1241
57165 ENSG00000277095 NA -0.1241
57163 ENSG00000277089 NA -0.1241
57162 ENSG00000277087 NA -0.1241
10 ENSG00000135535 CD164 CD164 molecule 23.9281
9 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 28.3997
8 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 33.1678
7 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 37.7665

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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