SHOGoiN Cell Transcriptome: GSM1677539

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677539


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T67The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 62.0471
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 58.6844
3 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 58.4647
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 43.2480
5 ENSG00000283041 NA 38.8174
6 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 38.1780
7 ENSG00000123416 TUBA1B tubulin alpha 1b 32.9469
8 ENSG00000258017 NA 32.3901
9 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 31.2352
10 ENSG00000224411 HSP90AA2P heat shock protein 90 alpha family class A member 2, pseudogene 31.0612

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000276988 NA -0.1488
57168 ENSG00000276984 NA -0.1488
57167 ENSG00000276980 NA -0.1488
57165 ENSG00000276975 HYDIN2 HYDIN2, axonemal central pair apparatus protein (pseudogene) -0.1488
57164 ENSG00000276972 NA -0.1488
57163 ENSG00000276968 NA -0.1488
57162 ENSG00000276966 HIST1H4E histone cluster 1 H4 family member e -0.1488
10 ENSG00000224411 HSP90AA2P heat shock protein 90 alpha family class A member 2, pseudogene 31.0612
9 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 31.2352
8 ENSG00000258017 NA 32.3901

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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