SHOGoiN Cell Transcriptome: GSM1677541

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677541


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T69The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 91.0829
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 60.4553
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 51.3021
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 44.4587
5 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 38.8495
6 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 37.6765
7 ENSG00000234782 TPT1P9 tumor protein, translationally-controlled 1 pseudogene 9 37.3572
8 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 33.4871
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 31.8408
10 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 30.3123

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000276888 NA -0.1342
57169 ENSG00000276884 NA -0.1342
57167 ENSG00000276878 MIR6074 microRNA 6074 -0.1342
57165 ENSG00000276874 NA -0.1342
57164 ENSG00000276873 NA -0.1342
57163 ENSG00000276872 NA -0.1342
57162 ENSG00000276871 NA -0.1342
10 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 30.3123
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 31.8408
8 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 33.4871

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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