SHOGoiN Cell Transcriptome: GSM1677542

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677542


Profile download
7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T70The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 92.6804
2 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 84.7464
3 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 79.4646
4 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 49.6042
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 46.7257
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 45.8348
7 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 42.8239
8 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 40.5942
9 ENSG00000124207 CSE1L chromosome segregation 1 like 30.8669
10 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 29.5282

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277027 RMRP RNA component of mitochondrial RNA processing endoribonuclease -0.1175
57169 ENSG00000277024 NA -0.1175
57167 ENSG00000277022 NA -0.1175
57165 ENSG00000277020 NA -0.1175
57164 ENSG00000277017 NA -0.1175
57163 ENSG00000277014 MIR3179-4 microRNA 3179-4 -0.1175
57162 ENSG00000277013 NA -0.1175
10 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 29.5282
9 ENSG00000124207 CSE1L chromosome segregation 1 like 30.8669
8 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 40.5942

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...