SHOGoiN Cell Transcriptome: GSM1677543

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677543


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T71The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 74.5544
2 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 47.0945
3 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 42.9864
4 ENSG00000283041 NA 36.7174
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 35.4921
6 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 34.2535
7 ENSG00000234782 TPT1P9 tumor protein, translationally-controlled 1 pseudogene 9 32.4890
8 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 31.2370
9 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 30.5286
10 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 30.3815

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277047 NA -0.1661
57169 ENSG00000277041 NA -0.1661
57168 ENSG00000277040 NA -0.1661
57167 ENSG00000277039 NA -0.1661
57166 ENSG00000277035 NA -0.1661
57165 ENSG00000277034 NA -0.1661
57164 ENSG00000277031 RN7SL796P RNA, 7SL, cytoplasmic 796, pseudogene -0.1661
57163 ENSG00000277030 MIR8071-2 microRNA 8071-2 -0.1661
57162 ENSG00000277029 RNU6-1192P RNA, U6 small nuclear 1192, pseudogene -0.1661
10 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 30.3815

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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