SHOGoiN Cell Transcriptome: GSM1677544

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677544


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T72The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 69.7213
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 49.7230
3 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 49.2632
4 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 39.6296
5 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 37.5720
6 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 36.1747
7 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 35.2491
8 ENSG00000120694 HSPH1 heat shock protein family H (Hsp110) member 1 32.3425
9 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 31.9239
10 ENSG00000169813 HNRNPF heterogeneous nuclear ribonucleoprotein F 30.5915

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277142 LINC00235 long intergenic non-protein coding RNA 235 -0.1487
57170 ENSG00000277141 NA -0.1487
57169 ENSG00000277138 MIR6509 microRNA 6509 -0.1487
57167 ENSG00000277136 NA -0.1487
57166 ENSG00000277135 NA -0.1487
57165 ENSG00000277133 NA -0.1487
57164 ENSG00000277130 NA -0.1487
57163 ENSG00000277129 NA -0.1487
57162 ENSG00000277128 NA -0.1487
10 ENSG00000169813 HNRNPF heterogeneous nuclear ribonucleoprotein F 30.5915

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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