SHOGoiN Cell Transcriptome: GSM1677545

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677545


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T73The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 92.9995
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 56.3247
3 ENSG00000234782 TPT1P9 tumor protein, translationally-controlled 1 pseudogene 9 44.5354
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 43.3205
5 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 42.4972
6 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 37.4588
7 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 37.1070
8 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 34.9314
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 33.7082
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 30.0826

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276991 NA -0.1437
57168 ENSG00000276988 NA -0.1437
57166 ENSG00000276984 NA -0.1437
57165 ENSG00000276980 NA -0.1437
57163 ENSG00000276975 HYDIN2 HYDIN2, axonemal central pair apparatus protein (pseudogene) -0.1437
57162 ENSG00000276972 NA -0.1437
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 30.0826
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 33.7082
8 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 34.9314
7 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 37.1070

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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