SHOGoiN Cell Transcriptome: GSM1677546

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677546


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T74The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 69.5110
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 61.8240
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 44.0891
4 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 43.6170
5 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 42.2153
6 ENSG00000234782 TPT1P9 tumor protein, translationally-controlled 1 pseudogene 9 38.6595
7 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 34.3512
8 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 29.9396
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 28.9659
10 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 28.1691

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277159 NA -0.1594
57169 ENSG00000277157 HIST1H4D histone cluster 1 H4 family member d -0.1594
57168 ENSG00000277156 NA -0.1594
57166 ENSG00000277152 NA -0.1594
57165 ENSG00000277151 NA -0.1594
57164 ENSG00000277147 LINC00869 long intergenic non-protein coding RNA 869 -0.1594
57163 ENSG00000277146 NA -0.1594
10 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 28.1691
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 28.9659
8 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 29.9396

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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