SHOGoiN Cell Transcriptome: GSM1677547

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677547


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T75The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 53.0466
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 52.0266
3 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 46.4137
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 45.7646
5 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 36.3624
6 ENSG00000123416 TUBA1B tubulin alpha 1b 34.8355
7 ENSG00000258017 NA 34.1741
8 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 31.4109
9 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 31.1451
10 ENSG00000082898 XPO1 exportin 1 29.6430

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277099 NA -0.1710
57169 ENSG00000277096 NA -0.1710
57168 ENSG00000277095 NA -0.1710
57166 ENSG00000277089 NA -0.1710
57165 ENSG00000277087 NA -0.1710
57164 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1710
57163 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.1710
10 ENSG00000082898 XPO1 exportin 1 29.6430
9 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 31.1451
8 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 31.4109

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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