SHOGoiN Cell Transcriptome: GSM1677549

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677549


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T77The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 65.9669
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 61.0210
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 50.2572
4 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 49.0538
5 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 28.5418
6 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 28.5418
7 ENSG00000258017 NA 27.8353
8 ENSG00000184009 ACTG1 actin gamma 1 27.3054
9 ENSG00000123416 TUBA1B tubulin alpha 1b 27.2060
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 25.5280

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277144 NA -0.1617
57169 ENSG00000277143 NA -0.1617
57168 ENSG00000277142 LINC00235 long intergenic non-protein coding RNA 235 -0.1617
57167 ENSG00000277141 NA -0.1617
57166 ENSG00000277138 MIR6509 microRNA 6509 -0.1617
57164 ENSG00000277136 NA -0.1617
57163 ENSG00000277135 NA -0.1617
57162 ENSG00000277133 NA -0.1617
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 25.5280
9 ENSG00000123416 TUBA1B tubulin alpha 1b 27.2060

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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