SHOGoiN Cell Transcriptome: GSM1677550

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677550


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T78The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 122.0890
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 104.6114
3 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 56.2164
4 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 49.4470
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 45.6566
6 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 44.2760
7 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 39.6246
8 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 38.3825
9 ENSG00000283041 NA 33.5034
10 ENSG00000184009 ACTG1 actin gamma 1 32.2812

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000276926 MIR6797 microRNA 6797 -0.1157
57169 ENSG00000276925 NA -0.1157
57167 ENSG00000276923 NA -0.1157
57164 ENSG00000276919 NA -0.1157
57163 ENSG00000276918 NA -0.1157
57162 ENSG00000276917 MIR8080 microRNA 8080 -0.1157
10 ENSG00000184009 ACTG1 actin gamma 1 32.2812
9 ENSG00000283041 NA 33.5034
8 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 38.3825
7 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 39.6246

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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