SHOGoiN Cell Transcriptome: GSM1677551

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677551


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T79The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 121.9867
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 84.4335
3 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 70.3843
4 ENSG00000184009 ACTG1 actin gamma 1 62.8680
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 55.4049
6 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 48.7762
7 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 37.1236
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 36.8786
9 ENSG00000283041 NA 36.1472
10 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 34.6347

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277020 NA -0.1066
57169 ENSG00000277017 NA -0.1066
57168 ENSG00000277014 MIR3179-4 microRNA 3179-4 -0.1066
57167 ENSG00000277013 NA -0.1066
57166 ENSG00000277011 NA -0.1066
57165 ENSG00000277010 NA -0.1066
57164 ENSG00000277009 NA -0.1066
57163 ENSG00000277008 TEX28P2 testis expressed 28 pseudogene 2 -0.1066
57162 ENSG00000277007 NA -0.1066
10 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 34.6347

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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