SHOGoiN Cell Transcriptome: GSM1677552

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677552


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T80The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 144.6979
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 84.6781
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 70.2023
4 ENSG00000184009 ACTG1 actin gamma 1 49.5067
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 38.2827
6 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 36.8388
7 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 33.7289
8 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 25.7321
9 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 25.2816
10 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 24.1463

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277013 NA -0.1158
57170 ENSG00000277011 NA -0.1158
57169 ENSG00000277010 NA -0.1158
57168 ENSG00000277009 NA -0.1158
57167 ENSG00000277008 TEX28P2 testis expressed 28 pseudogene 2 -0.1158
57166 ENSG00000277007 NA -0.1158
57165 ENSG00000277004 RNA5SP412 RNA, 5S ribosomal pseudogene 412 -0.1158
57164 ENSG00000277003 NA -0.1158
57162 ENSG00000277001 NA -0.1158
10 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 24.1463

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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