SHOGoiN Cell Transcriptome: GSM1677553

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677553


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T81The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 137.5500
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 93.1533
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 51.6672
4 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 50.1548
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 41.9068
6 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 40.4823
7 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 37.7476
8 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 37.0266
9 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 35.2504
10 ENSG00000184009 ACTG1 actin gamma 1 34.0985

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277152 NA -0.0982
57169 ENSG00000277147 LINC00869 long intergenic non-protein coding RNA 869 -0.0982
57168 ENSG00000277146 NA -0.0982
57166 ENSG00000277144 NA -0.0982
57165 ENSG00000277143 NA -0.0982
57164 ENSG00000277142 LINC00235 long intergenic non-protein coding RNA 235 -0.0982
57163 ENSG00000277141 NA -0.0982
57162 ENSG00000277138 MIR6509 microRNA 6509 -0.0982
10 ENSG00000184009 ACTG1 actin gamma 1 34.0985
9 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 35.2504

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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