SHOGoiN Cell Transcriptome: GSM1677554

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677554


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T82The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 95.2788
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 89.1071
3 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 66.3972
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 62.3952
5 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 50.8594
6 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 42.2528
7 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 41.4331
8 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 38.8777
9 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 36.3583
10 ENSG00000184009 ACTG1 actin gamma 1 27.8240

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277188 NA -0.1174
57170 ENSG00000277186 NA -0.1174
57169 ENSG00000277184 SNORA9 small nucleolar RNA, H/ACA box 9 -0.1174
57168 ENSG00000277182 NA -0.1174
57166 ENSG00000277174 NA -0.1174
57165 ENSG00000277173 NA -0.1174
57164 ENSG00000277172 GAPDHP41 glyceraldehyde 3 phosphate dehydrogenase pseudogene 41 -0.1174
57163 ENSG00000277171 NA -0.1174
57162 ENSG00000277170 NA -0.1174
10 ENSG00000184009 ACTG1 actin gamma 1 27.8240

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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