SHOGoiN Cell Transcriptome: GSM1677556

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677556


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T84The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 135.5673
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 92.1006
3 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 53.0697
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 52.1406
5 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 52.0432
6 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 45.8015
7 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 42.9317
8 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 37.4843
9 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 37.1097
10 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 30.9430

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277171 NA -0.0929
57170 ENSG00000277170 NA -0.0929
57168 ENSG00000277168 NA -0.0929
57167 ENSG00000277162 NA -0.0929
57166 ENSG00000277161 PIGW phosphatidylinositol glycan anchor biosynthesis class W -0.0929
57164 ENSG00000277159 NA -0.0929
57162 ENSG00000277157 HIST1H4D histone cluster 1 H4 family member d -0.0929
10 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 30.9430
9 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 37.1097
8 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 37.4843

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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