SHOGoiN Cell Transcriptome: GSM1677557

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677557


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T85The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 122.5626
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 97.3852
3 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 45.8647
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 44.4603
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 43.9012
6 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 38.5903
7 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 38.4404
8 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 33.3135
9 ENSG00000184009 ACTG1 actin gamma 1 31.3978
10 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 29.8229

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277125 NA -0.1131
57170 ENSG00000277124 NA -0.1131
57166 ENSG00000277120 MIR6089 microRNA 6089 -0.1131
57165 ENSG00000277119 NA -0.1131
57164 ENSG00000277118 NA -0.1131
57163 ENSG00000277117 ICOS ligand -0.1131
10 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 29.8229
9 ENSG00000184009 ACTG1 actin gamma 1 31.3978
8 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 33.3135
7 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 38.4404

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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