SHOGoiN Cell Transcriptome: GSM1677559

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677559


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T87The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 137.3107
2 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 61.3262
3 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 59.2199
4 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 54.1586
5 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 44.0759
6 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 41.9697
7 ENSG00000234782 TPT1P9 tumor protein, translationally-controlled 1 pseudogene 9 35.5308
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 32.0391
9 ENSG00000283041 NA 31.8469
10 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 31.7829

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277089 NA -0.1230
57170 ENSG00000277087 NA -0.1230
57169 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1230
57168 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.1230
57166 ENSG00000277081 NA -0.1230
57165 ENSG00000277077 NA -0.1230
57163 ENSG00000277073 MIR6131 microRNA 6131 -0.1230
57162 ENSG00000277072 STAG3L2 stromal antigen 3-like 2 (pseudogene) -0.1230
10 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 31.7829
9 ENSG00000283041 NA 31.8469

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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