SHOGoiN Cell Transcriptome: GSM1677560

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677560


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T88The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 137.2250
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 87.9523
3 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 62.5129
4 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 56.9940
5 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 55.4815
6 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 45.2964
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 42.5574
8 ENSG00000283041 NA 26.6724
9 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 24.3363
10 ENSG00000234782 TPT1P9 tumor protein, translationally-controlled 1 pseudogene 9 24.2078

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277096 NA -0.1161
57169 ENSG00000277095 NA -0.1161
57167 ENSG00000277089 NA -0.1161
57166 ENSG00000277087 NA -0.1161
57165 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1161
57164 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.1161
57162 ENSG00000277081 NA -0.1161
10 ENSG00000234782 TPT1P9 tumor protein, translationally-controlled 1 pseudogene 9 24.2078
9 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 24.3363
8 ENSG00000283041 NA 26.6724

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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