SHOGoiN Cell Transcriptome: GSM1677561

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677561


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T89The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 125.4711
2 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 81.1032
3 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 58.2397
4 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 49.5793
5 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 48.1537
6 ENSG00000283041 NA 41.0255
7 ENSG00000184009 ACTG1 actin gamma 1 37.9744
8 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 35.7893
9 ENSG00000242071 RPL7AP6 ribosomal protein L7a pseudogene 6 32.3385
10 ENSG00000234782 TPT1P9 tumor protein, translationally-controlled 1 pseudogene 9 31.3126

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57169 ENSG00000277103 NA -0.1180
57166 ENSG00000277099 NA -0.1180
57164 ENSG00000277096 NA -0.1180
57163 ENSG00000277095 NA -0.1180
10 ENSG00000234782 TPT1P9 tumor protein, translationally-controlled 1 pseudogene 9 31.3126
9 ENSG00000242071 RPL7AP6 ribosomal protein L7a pseudogene 6 32.3385
8 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 35.7893
7 ENSG00000184009 ACTG1 actin gamma 1 37.9744
6 ENSG00000283041 NA 41.0255
5 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 48.1537

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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