SHOGoiN Cell Transcriptome: GSM1677562

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677562


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T90The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 128.5581
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 124.8180
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 67.1658
4 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 46.6393
5 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 40.9302
6 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 39.2472
7 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 32.8010
8 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 28.0709
9 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 24.4299
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 22.3838

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277161 PIGW phosphatidylinositol glycan anchor biosynthesis class W -0.1007
57169 ENSG00000277159 NA -0.1007
57167 ENSG00000277157 HIST1H4D histone cluster 1 H4 family member d -0.1007
57166 ENSG00000277156 NA -0.1007
57164 ENSG00000277152 NA -0.1007
57163 ENSG00000277151 NA -0.1007
57162 ENSG00000277150 F8A3 coagulation factor VIII associated 3 -0.1007
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 22.3838
9 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 24.4299
8 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 28.0709

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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