SHOGoiN Cell Transcriptome: GSM1677563

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677563


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T91The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 176.6597
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 82.4712
3 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 44.9540
4 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 44.6375
5 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 31.1237
6 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 27.5897
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 26.4257
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 25.4411
9 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 25.0719
10 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 24.2701

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277047 NA -0.0990
57168 ENSG00000277041 NA -0.0990
57167 ENSG00000277040 NA -0.0990
57166 ENSG00000277039 NA -0.0990
57165 ENSG00000277035 NA -0.0990
57164 ENSG00000277034 NA -0.0990
57163 ENSG00000277031 RN7SL796P RNA, 7SL, cytoplasmic 796, pseudogene -0.0990
57162 ENSG00000277030 MIR8071-2 microRNA 8071-2 -0.0990
10 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 24.2701
9 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 25.0719

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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