SHOGoiN Cell Transcriptome: GSM1677564

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677564


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T92The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 182.9184
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 105.3698
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 40.4871
4 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 35.9437
5 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 26.1713
6 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 25.7651
7 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 24.8365
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 23.9853
9 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 23.5486
10 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 22.8577

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.0780
57169 ENSG00000277081 NA -0.0780
57168 ENSG00000277077 NA -0.0780
57167 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.0780
57165 ENSG00000277073 MIR6131 microRNA 6131 -0.0780
57164 ENSG00000277072 STAG3L2 stromal antigen 3-like 2 (pseudogene) -0.0780
57163 ENSG00000277067 uncharacterized LOC102724843 -0.0780
57162 ENSG00000277066 NA -0.0780
10 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 22.8577
9 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 23.5486

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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