SHOGoiN Cell Transcriptome: GSM1677565

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677565


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T93The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 104.3899
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 91.0530
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 72.3754
4 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 63.3200
5 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 48.1481
6 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 44.4484
7 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 40.1370
8 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 39.0629
9 ENSG00000234782 TPT1P9 tumor protein, translationally-controlled 1 pseudogene 9 38.8391
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 35.1543

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277151 NA -0.1124
57170 ENSG00000277150 F8A3 coagulation factor VIII associated 3 -0.1124
57169 ENSG00000277149 TYW1B tRNA-yW synthesizing protein 1 homolog B -0.1124
57168 ENSG00000277147 LINC00869 long intergenic non-protein coding RNA 869 -0.1124
57167 ENSG00000277146 NA -0.1124
57165 ENSG00000277144 NA -0.1124
57164 ENSG00000277143 NA -0.1124
57163 ENSG00000277142 LINC00235 long intergenic non-protein coding RNA 235 -0.1124
57162 ENSG00000277141 NA -0.1124
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 35.1543

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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