SHOGoiN Cell Transcriptome: GSM1677567

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677567


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T95The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 82.4266
2 ENSG00000184009 ACTG1 actin gamma 1 71.7585
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 69.0748
4 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 64.6175
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 59.2299
6 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 43.4487
7 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 39.1520
8 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 36.6557
9 ENSG00000283041 NA 35.0294
10 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 34.2597

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.1270
57170 ENSG00000277109 NA -0.1270
57169 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.1270
57166 ENSG00000277103 NA -0.1270
57163 ENSG00000277099 NA -0.1270
10 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 34.2597
9 ENSG00000283041 NA 35.0294
8 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 36.6557
7 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 39.1520
6 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 43.4487

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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