SHOGoiN Cell Transcriptome: GSM1677568

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677568


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T96The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 94.2059
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 83.3299
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 68.8586
4 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 67.5201
5 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 49.6275
6 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 43.9675
7 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 42.3229
8 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 40.9544
9 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 39.9040
10 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 34.1239

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277129 NA -0.1187
57170 ENSG00000277128 NA -0.1187
57169 ENSG00000277127 NA -0.1187
57168 ENSG00000277125 NA -0.1187
57167 ENSG00000277124 NA -0.1187
57163 ENSG00000277120 MIR6089 microRNA 6089 -0.1187
57162 ENSG00000277119 NA -0.1187
10 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 34.1239
9 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 39.9040
8 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 40.9544

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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