SHOGoiN Cell Transcriptome: GSM1677570

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677570


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T98The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 145.7267
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 74.0255
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 67.0903
4 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 42.6277
5 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 42.3524
6 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 42.2663
7 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 41.5952
8 ENSG00000184009 ACTG1 actin gamma 1 37.6113
9 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 31.4333
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 31.2440

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277120 MIR6089 microRNA 6089 -0.1108
57169 ENSG00000277119 NA -0.1108
57168 ENSG00000277118 NA -0.1108
57167 ENSG00000277117 ICOS ligand -0.1108
57164 ENSG00000277109 NA -0.1108
57163 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.1108
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 31.2440
9 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 31.4333
8 ENSG00000184009 ACTG1 actin gamma 1 37.6113
7 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 41.5952

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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