SHOGoiN Cell Transcriptome: GSM1677571

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677571


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T99The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 99.4329
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 82.5802
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 65.2813
4 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 61.8041
5 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 46.5451
6 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 37.5103
7 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 32.9726
8 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 31.6918
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 31.2398
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 30.7414

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277109 NA -0.1301
57170 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.1301
57167 ENSG00000277103 NA -0.1301
57164 ENSG00000277099 NA -0.1301
57162 ENSG00000277096 NA -0.1301
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 30.7414
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 31.2398
8 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 31.6918
7 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 32.9726
6 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 37.5103

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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