SHOGoiN Cell Transcriptome: GSM1677573

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677573


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T101The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 117.6892
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 106.4959
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 56.0661
4 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 55.8158
5 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 36.5830
6 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 36.5630
7 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 35.1012
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 33.0087
9 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 32.0676
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 30.6159

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.1206
57169 ENSG00000277109 NA -0.1206
57168 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.1206
57165 ENSG00000277103 NA -0.1206
57162 ENSG00000277099 NA -0.1206
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 30.6159
9 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 32.0676
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 33.0087
7 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 35.1012
6 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 36.5630

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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