SHOGoiN Cell Transcriptome: GSM1677576

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677576


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T104The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 160.8464
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 85.0725
3 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 59.9935
4 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 48.0459
5 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 42.7804
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 39.7919
7 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 36.6223
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 35.4644
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 32.5988
10 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 29.9143

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277096 NA -0.1003
57170 ENSG00000277095 NA -0.1003
57168 ENSG00000277089 NA -0.1003
57167 ENSG00000277087 NA -0.1003
57166 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1003
57165 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.1003
57163 ENSG00000277081 NA -0.1003
57162 ENSG00000277077 NA -0.1003
10 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 29.9143
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 32.5988

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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