SHOGoiN Cell Transcriptome: GSM1677577

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677577


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T105The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 116.4750
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 59.4803
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 57.1952
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 55.1040
5 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 47.8559
6 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 47.2388
7 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 40.6844
8 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 34.5076
9 ENSG00000184009 ACTG1 actin gamma 1 34.4973
10 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 32.6254

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277103 NA -0.1361
57168 ENSG00000277099 NA -0.1361
57166 ENSG00000277096 NA -0.1361
57165 ENSG00000277095 NA -0.1361
57163 ENSG00000277089 NA -0.1361
57162 ENSG00000277087 NA -0.1361
10 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 32.6254
9 ENSG00000184009 ACTG1 actin gamma 1 34.4973
8 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 34.5076
7 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 40.6844

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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