SHOGoiN Cell Transcriptome: GSM1677579

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677579


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T107The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 148.3727
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 83.9433
3 ENSG00000184009 ACTG1 actin gamma 1 53.3679
4 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 52.6943
5 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 46.5391
6 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 36.8596
7 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 29.0892
8 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 27.9802
9 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 27.5225
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 26.8936

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277125 NA -0.1167
57170 ENSG00000277124 NA -0.1167
57166 ENSG00000277120 MIR6089 microRNA 6089 -0.1167
57165 ENSG00000277119 NA -0.1167
57164 ENSG00000277118 NA -0.1167
57163 ENSG00000277117 ICOS ligand -0.1167
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 26.8936
9 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 27.5225
8 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 27.9802
7 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 29.0892

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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