SHOGoiN Cell Transcriptome: GSM1677582

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677582


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T110The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 146.0859
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 91.6561
3 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 43.1124
4 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 42.8019
5 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 40.4555
6 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 36.3259
7 ENSG00000184009 ACTG1 actin gamma 1 35.8069
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 32.8261
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 31.9301
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 30.3333

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000275942 NA -0.1307
57170 ENSG00000275940 MRPL57P3 mitochondrial ribosomal protein L57 pseudogene 3 -0.1307
57169 ENSG00000275939 NA -0.1307
57168 ENSG00000275936 NA -0.1307
57166 ENSG00000275933 NA -0.1307
57165 ENSG00000275930 NA -0.1307
57164 ENSG00000275927 NA -0.1307
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 30.3333
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 31.9301
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 32.8261

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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