SHOGoiN Cell Transcriptome: GSM1677584

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677584


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T112The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 115.3862
2 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 87.5138
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 66.3480
4 ENSG00000224411 HSP90AA2P heat shock protein 90 alpha family class A member 2, pseudogene 59.2840
5 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 50.1600
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 43.4892
7 ENSG00000184009 ACTG1 actin gamma 1 43.4405
8 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 36.9062
9 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 24.9780
10 ENSG00000123416 TUBA1B tubulin alpha 1b 24.9683

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277040 NA -0.1292
57170 ENSG00000277039 NA -0.1292
57169 ENSG00000277035 NA -0.1292
57168 ENSG00000277034 NA -0.1292
57167 ENSG00000277031 RN7SL796P RNA, 7SL, cytoplasmic 796, pseudogene -0.1292
57166 ENSG00000277030 MIR8071-2 microRNA 8071-2 -0.1292
57165 ENSG00000277029 RNU6-1192P RNA, U6 small nuclear 1192, pseudogene -0.1292
57164 ENSG00000277027 RMRP RNA component of mitochondrial RNA processing endoribonuclease -0.1292
57162 ENSG00000277024 NA -0.1292
10 ENSG00000123416 TUBA1B tubulin alpha 1b 24.9683

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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