SHOGoiN Cell Transcriptome: GSM1677585

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677585


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T113The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 173.8880
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 101.8039
3 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 44.5728
4 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 36.3179
5 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 33.4061
6 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 32.0703
7 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 30.2758
8 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 27.4936
9 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 27.0591
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 26.6975

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277039 NA -0.0912
57170 ENSG00000277035 NA -0.0912
57169 ENSG00000277034 NA -0.0912
57168 ENSG00000277031 RN7SL796P RNA, 7SL, cytoplasmic 796, pseudogene -0.0912
57167 ENSG00000277030 MIR8071-2 microRNA 8071-2 -0.0912
57166 ENSG00000277029 RNU6-1192P RNA, U6 small nuclear 1192, pseudogene -0.0912
57165 ENSG00000277027 RMRP RNA component of mitochondrial RNA processing endoribonuclease -0.0912
57163 ENSG00000277024 NA -0.0912
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 26.6975
9 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 27.0591

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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