SHOGoiN Cell Transcriptome: GSM1677586

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677586


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T114The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 109.6932
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 96.0208
3 ENSG00000283041 NA 49.7890
4 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 46.8743
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 45.9108
6 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 44.3394
7 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 42.4884
8 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 39.7083
9 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 39.3077
10 ENSG00000234782 TPT1P9 tumor protein, translationally-controlled 1 pseudogene 9 35.8024

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277077 NA -0.1207
57169 ENSG00000277073 MIR6131 microRNA 6131 -0.1207
57168 ENSG00000277072 STAG3L2 stromal antigen 3-like 2 (pseudogene) -0.1207
57167 ENSG00000277067 uncharacterized LOC102724843 -0.1207
57165 ENSG00000277063 MIR8084 microRNA 8084 -0.1207
57164 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.1207
57162 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.1207
10 ENSG00000234782 TPT1P9 tumor protein, translationally-controlled 1 pseudogene 9 35.8024
9 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 39.3077
8 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 39.7083

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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