SHOGoiN Cell Transcriptome: GSM1677590

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677590


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T118The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 154.8698
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 140.7826
3 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 64.7824
4 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 64.2825
5 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 49.8909
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 37.5910
7 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 33.2302
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 29.2112
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 22.6623
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 17.6732

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57169 ENSG00000277103 NA -0.0410
57166 ENSG00000277099 NA -0.0410
57164 ENSG00000277096 NA -0.0410
57163 ENSG00000277095 NA -0.0410
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 17.6732
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 22.6623
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 29.2112
7 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 33.2302
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 37.5910
5 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 49.8909

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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