SHOGoiN Cell Transcriptome: GSM1677591

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677591


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T119The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 175.7562
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 93.2166
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 52.5491
4 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 37.7223
5 ENSG00000184009 ACTG1 actin gamma 1 37.3262
6 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 37.1007
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 34.7078
8 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 28.1811
9 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 27.0516
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 25.4124

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277001 NA -0.0770
57169 ENSG00000277000 DUSP12P1 dual specificity phosphatase 12 pseudogene 1 -0.0770
57168 ENSG00000276998 REXO1L2P REXO1 like 2, pseudogene -0.0770
57167 ENSG00000276997 NA -0.0770
57165 ENSG00000276993 NA -0.0770
57164 ENSG00000276992 NA -0.0770
57163 ENSG00000276991 NA -0.0770
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 25.4124
9 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 27.0516
8 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 28.1811

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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