SHOGoiN Cell Transcriptome: GSM1677591

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677591


Profile download
7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T119The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 156.0864
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 89.9312
3 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 74.5798
4 ENSG00000184009 ACTG1 actin gamma 1 44.3622
5 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 36.3173
6 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 35.9544
7 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 33.5506
8 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 33.4013
9 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 33.1587
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 33.0052

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0724
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0724
58733 ENSG00000285992 novel transcript -0.0724
58732 ENSG00000285991 novel transcript -0.0724
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0724
58730 ENSG00000285989 TEC -0.0724
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0724
58728 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0724
58727 ENSG00000285985 NA -0.0724
58726 ENSG00000285984 novel transcript -0.0724

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...