SHOGoiN Cell Transcriptome: GSM1677592

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677592


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T120The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 181.7473
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 111.6131
3 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 50.9586
4 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 46.4078
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 36.0892
6 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 32.4412
7 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 28.7427
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 27.9543
9 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 23.7784
10 ENSG00000184009 ACTG1 actin gamma 1 23.4489

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277124 NA -0.0513
57167 ENSG00000277120 MIR6089 microRNA 6089 -0.0513
57166 ENSG00000277119 NA -0.0513
57165 ENSG00000277118 NA -0.0513
57164 ENSG00000277117 ICOS ligand -0.0513
10 ENSG00000184009 ACTG1 actin gamma 1 23.4489
9 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 23.7784
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 27.9543
7 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 28.7427
6 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 32.4412

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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