SHOGoiN Cell Transcriptome: GSM1677593

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677593


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T121The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 161.7021
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 142.5866
3 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 58.0484
4 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 53.9733
5 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 38.2449
6 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 34.4326
7 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 27.9953
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 27.7773
9 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 22.0976
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 14.8548

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277030 MIR8071-2 microRNA 8071-2 -0.0434
57170 ENSG00000277029 RNU6-1192P RNA, U6 small nuclear 1192, pseudogene -0.0434
57169 ENSG00000277027 RMRP RNA component of mitochondrial RNA processing endoribonuclease -0.0434
57167 ENSG00000277024 NA -0.0434
57165 ENSG00000277022 NA -0.0434
57163 ENSG00000277020 NA -0.0434
57162 ENSG00000277017 NA -0.0434
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 14.8548
9 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 22.0976
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 27.7773

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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