SHOGoiN Cell Transcriptome: GSM1677595

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677595


Profile download
7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T123The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 180.0358
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 115.3979
3 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 81.4641
4 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 41.6179
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 41.3788
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 39.2428
7 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 30.9317
8 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 23.5533
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 17.4451
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 13.9123

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277120 MIR6089 microRNA 6089 -0.0309
57170 ENSG00000277119 NA -0.0309
57169 ENSG00000277118 NA -0.0309
57168 ENSG00000277117 ICOS ligand -0.0309
57165 ENSG00000277109 NA -0.0309
57164 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.0309
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 13.9123
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 17.4451
8 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 23.5533
7 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 30.9317

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...